PhenotypicFeature

new PhenotypicFeature(opt_dataopt)

Description:

Generated by JsPbCodeGenerator.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 37

Parameters:

Name	Type	Attributes	Description
`opt_data`	Array	<optional>	Optional initial data array, typically from a server response, or constructed directly in Javascript. The array is used in place and becomes part of the constructed object. It is not cloned. If no data is provided, the constructed object will be empty, but still valid.

Extends

jspb.Message

Members

(static) displayName

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 46

(private, static, constant) repeatedFields_

Description:

List of repeated fields within this message type.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 54

List of repeated fields within this message type.

Methods

addEvidence(opt_valueopt, non-null, opt_indexopt) → (non-null) {proto.org.phenopackets.schema.v2.core.Evidence}

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 511

Parameters:

Name	Type	Attributes	Description
`opt_value`	proto.org.phenopackets.schema.v2.core.Evidence	<optional>
`opt_index`	number	<optional>

Returns:

Type: proto.org.phenopackets.schema.v2.core.Evidence

addModifiers(opt_valueopt, non-null, opt_indexopt) → (non-null) {proto.org.phenopackets.schema.v2.core.OntologyClass}

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 399

Parameters:

Name	Type	Attributes	Description
`opt_value`	proto.org.phenopackets.schema.v2.core.OntologyClass	<optional>
`opt_index`	number	<optional>

Returns:

Type: proto.org.phenopackets.schema.v2.core.OntologyClass

clearEvidenceList() → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Description:

Clears the list making it empty but non-null.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 520

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

clearModifiersList() → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Description:

Clears the list making it empty but non-null.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 408

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

clearOnset() → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 436

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

clearResolution() → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 473

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

clearSeverity() → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 361

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

clearType() → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 306

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

getDescription() → {string}

Description:

optional string description = 1;

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 269

Returns:

Type: string

getEvidenceList() → (non-null) {Array.<!proto.org.phenopackets.schema.v2.core.Evidence>}

Description:

repeated Evidence evidence = 8;

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 491

Returns:

Type: Array.<!proto.org.phenopackets.schema.v2.core.Evidence>

getExcluded() → {boolean}

Description:

optional bool excluded = 3;

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 324

Returns:

Type: boolean

getModifiersList() → (non-null) {Array.<!proto.org.phenopackets.schema.v2.core.OntologyClass>}

Description:

repeated OntologyClass modifiers = 5;

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 379

Returns:

Type: Array.<!proto.org.phenopackets.schema.v2.core.OntologyClass>

getOnset() → (nullable) {proto.org.phenopackets.schema.v2.core.TimeElement}

Description:

optional TimeElement onset = 6;

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 417

Returns:

Type: proto.org.phenopackets.schema.v2.core.TimeElement

getResolution() → (nullable) {proto.org.phenopackets.schema.v2.core.TimeElement}

Description:

optional TimeElement resolution = 7;

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 454

Returns:

Type: proto.org.phenopackets.schema.v2.core.TimeElement

getSeverity() → (nullable) {proto.org.phenopackets.schema.v2.core.OntologyClass}

Description:

optional OntologyClass severity = 4;

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 342

Returns:

Type: proto.org.phenopackets.schema.v2.core.OntologyClass

getType() → (nullable) {proto.org.phenopackets.schema.v2.core.OntologyClass}

Description:

optional OntologyClass type = 2;

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 287

Returns:

Type: proto.org.phenopackets.schema.v2.core.OntologyClass

hasOnset() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 445

Returns:

Type: boolean

hasResolution() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 482

Returns:

Type: boolean

hasSeverity() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 370

Returns:

Type: boolean

hasType() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 315

Returns:

Type: boolean

serializeBinary() → (non-null) {Uint8Array}

Description:

Serializes the message to binary data (in protobuf wire format).

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 184

Returns:

Type: Uint8Array

setDescription(value) → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 278

Parameters:

Name	Type	Description
`value`	string

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

setEvidenceList(valuenon-null) → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 501

Parameters:

Name	Type	Description
`value`	Array.<!proto.org.phenopackets.schema.v2.core.Evidence>

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

setExcluded(value) → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 333

Parameters:

Name	Type	Description
`value`	boolean

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

setModifiersList(valuenon-null) → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 389

Parameters:

Name	Type	Description
`value`	Array.<!proto.org.phenopackets.schema.v2.core.OntologyClass>

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

setOnset(value) → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 427

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v2.core.TimeElement \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

setResolution(value) → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 464

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v2.core.TimeElement \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

setSeverity(value) → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 352

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v2.core.OntologyClass \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

setType(value) → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 297

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v2.core.OntologyClass \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

toObject(opt_includeInstanceopt) → (non-null) {Object}

Description:

Creates an object representation of this proto. Field names that are reserved in JavaScript and will be renamed to pb_name. Optional fields that are not set will be set to undefined. To access a reserved field use, foo.pb_, eg, foo.pb_default. For the list of reserved names please see: net/proto2/compiler/js/internal/generator.cc#kKeyword.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 71

Parameters:

Name	Type	Attributes	Description
`opt_includeInstance`	boolean	<optional>	Deprecated. whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration

Returns:

Type: Object

(static) deserializeBinary(bytes) → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Description:

Deserializes binary data (in protobuf wire format).

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 112

Parameters:

Name	Type	Description
`bytes`	jspb.ByteSource	The bytes to deserialize.

Returns:

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

(static) deserializeBinaryFromReader(msgnon-null, readernon-null) → (non-null) {proto.org.phenopackets.schema.v2.core.PhenotypicFeature}

Description:

Deserializes binary data (in protobuf wire format) from the given reader into the given message object.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 126

Parameters:

Name	Type	Description
`msg`	proto.org.phenopackets.schema.v2.core.PhenotypicFeature	The message object to deserialize into.
`reader`	jspb.BinaryReader	The BinaryReader to use.

Returns:

Type: proto.org.phenopackets.schema.v2.core.PhenotypicFeature

(static) serializeBinaryToWriter(messagenon-null, writernon-null)

Description:

Serializes the given message to binary data (in protobuf wire format), writing to the given BinaryWriter.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 198

Parameters:

Name	Type	Description
`message`	proto.org.phenopackets.schema.v2.core.PhenotypicFeature
`writer`	jspb.BinaryWriter

(static) toObject(includeInstance, msgnon-null) → (non-null) {Object}

Description:

Static version of the {@see toObject} method.

Source:

phenopackets/schema/v2/core/phenotypic_feature_pb.js, line 85

Parameters:

Name	Type	Description
`includeInstance`	boolean \| undefined	Deprecated. Whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration
`msg`	proto.org.phenopackets.schema.v2.core.PhenotypicFeature	The msg instance to transform.

Returns:

Type: Object