PhenotypicFeature

new PhenotypicFeature(opt_dataopt)

Description:

Generated by JsPbCodeGenerator.

Source:

phenopackets/schema/v1/base_pb.js, line 151

Parameters:

Name	Type	Attributes	Description
`opt_data`	Array	<optional>	Optional initial data array, typically from a server response, or constructed directly in Javascript. The array is used in place and becomes part of the constructed object. It is not cloned. If no data is provided, the constructed object will be empty, but still valid.

Extends

jspb.Message

Members

(static) OnsetCase :number

Source:

phenopackets/schema/v1/base_pb.js, line 1598

Properties:

Name	Type	Description
`ONSET_NOT_SET`	number
`AGE_OF_ONSET`	number
`AGE_RANGE_OF_ONSET`	number
`CLASS_OF_ONSET`	number

Type:

number

(static) displayName

Source:

phenopackets/schema/v1/base_pb.js, line 160

(private, static, constant) oneofGroups_

Description:

Oneof group definitions for this message. Each group defines the field numbers belonging to that group. When of these fields' value is set, all other fields in the group are cleared. During deserialization, if multiple fields are encountered for a group, only the last value seen will be kept.

Source:

phenopackets/schema/v1/base_pb.js, line 1593

Oneof group definitions for this message. Each group defines the field numbers belonging to that group. When of these fields' value is set, all other fields in the group are cleared. During deserialization, if multiple fields are encountered for a group, only the last value seen will be kept.

(private, static, constant) repeatedFields_

Description:

List of repeated fields within this message type.

Source:

phenopackets/schema/v1/base_pb.js, line 1583

List of repeated fields within this message type.

Methods

addEvidence(opt_valueopt, non-null, opt_indexopt) → (non-null) {proto.org.phenopackets.schema.v1.core.Evidence}

Source:

phenopackets/schema/v1/base_pb.js, line 2118

Parameters:

Name	Type	Attributes	Description
`opt_value`	proto.org.phenopackets.schema.v1.core.Evidence	<optional>
`opt_index`	number	<optional>

Returns:

Type: proto.org.phenopackets.schema.v1.core.Evidence

addModifiers(opt_valueopt, non-null, opt_indexopt) → (non-null) {proto.org.phenopackets.schema.v1.core.OntologyClass}

Source:

phenopackets/schema/v1/base_pb.js, line 1969

Parameters:

Name	Type	Attributes	Description
`opt_value`	proto.org.phenopackets.schema.v1.core.OntologyClass	<optional>
`opt_index`	number	<optional>

Returns:

Type: proto.org.phenopackets.schema.v1.core.OntologyClass

clearAgeOfOnset() → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v1/base_pb.js, line 2006

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

clearAgeRangeOfOnset() → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v1/base_pb.js, line 2043

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

clearClassOfOnset() → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v1/base_pb.js, line 2080

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

clearEvidenceList() → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Description:

Clears the list making it empty but non-null.

Source:

phenopackets/schema/v1/base_pb.js, line 2127

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

clearModifiersList() → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Description:

Clears the list making it empty but non-null.

Source:

phenopackets/schema/v1/base_pb.js, line 1978

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

clearSeverity() → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v1/base_pb.js, line 1931

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

clearType() → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v1/base_pb.js, line 1876

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

getAgeOfOnset() → (nullable) {proto.org.phenopackets.schema.v1.core.Age}

Description:

optional Age age_of_onset = 6;

Source:

phenopackets/schema/v1/base_pb.js, line 1987

Returns:

Type: proto.org.phenopackets.schema.v1.core.Age

getAgeRangeOfOnset() → (nullable) {proto.org.phenopackets.schema.v1.core.AgeRange}

Description:

optional AgeRange age_range_of_onset = 7;

Source:

phenopackets/schema/v1/base_pb.js, line 2024

Returns:

Type: proto.org.phenopackets.schema.v1.core.AgeRange

getClassOfOnset() → (nullable) {proto.org.phenopackets.schema.v1.core.OntologyClass}

Description:

optional OntologyClass class_of_onset = 9;

Source:

phenopackets/schema/v1/base_pb.js, line 2061

Returns:

Type: proto.org.phenopackets.schema.v1.core.OntologyClass

getDescription() → {string}

Description:

optional string description = 1;

Source:

phenopackets/schema/v1/base_pb.js, line 1839

Returns:

Type: string

getEvidenceList() → (non-null) {Array.<!proto.org.phenopackets.schema.v1.core.Evidence>}

Description:

repeated Evidence evidence = 10;

Source:

phenopackets/schema/v1/base_pb.js, line 2098

Returns:

Type: Array.<!proto.org.phenopackets.schema.v1.core.Evidence>

getModifiersList() → (non-null) {Array.<!proto.org.phenopackets.schema.v1.core.OntologyClass>}

Description:

repeated OntologyClass modifiers = 5;

Source:

phenopackets/schema/v1/base_pb.js, line 1949

Returns:

Type: Array.<!proto.org.phenopackets.schema.v1.core.OntologyClass>

getNegated() → {boolean}

Description:

optional bool negated = 3;

Source:

phenopackets/schema/v1/base_pb.js, line 1894

Returns:

Type: boolean

getOnsetCase() → {proto.org.phenopackets.schema.v1.core.PhenotypicFeature.OnsetCase}

Source:

phenopackets/schema/v1/base_pb.js, line 1608

Returns:

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature.OnsetCase

getSeverity() → (nullable) {proto.org.phenopackets.schema.v1.core.OntologyClass}

Description:

optional OntologyClass severity = 4;

Source:

phenopackets/schema/v1/base_pb.js, line 1912

Returns:

Type: proto.org.phenopackets.schema.v1.core.OntologyClass

getType() → (nullable) {proto.org.phenopackets.schema.v1.core.OntologyClass}

Description:

optional OntologyClass type = 2;

Source:

phenopackets/schema/v1/base_pb.js, line 1857

Returns:

Type: proto.org.phenopackets.schema.v1.core.OntologyClass

hasAgeOfOnset() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v1/base_pb.js, line 2015

Returns:

Type: boolean

hasAgeRangeOfOnset() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v1/base_pb.js, line 2052

Returns:

Type: boolean

hasClassOfOnset() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v1/base_pb.js, line 2089

Returns:

Type: boolean

hasSeverity() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v1/base_pb.js, line 1940

Returns:

Type: boolean

hasType() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v1/base_pb.js, line 1885

Returns:

Type: boolean

serializeBinary() → (non-null) {Uint8Array}

Description:

Serializes the message to binary data (in protobuf wire format).

Source:

phenopackets/schema/v1/base_pb.js, line 1746

Returns:

Type: Uint8Array

setAgeOfOnset(value) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Source:

phenopackets/schema/v1/base_pb.js, line 1997

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v1.core.Age \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

setAgeRangeOfOnset(value) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Source:

phenopackets/schema/v1/base_pb.js, line 2034

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v1.core.AgeRange \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

setClassOfOnset(value) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Source:

phenopackets/schema/v1/base_pb.js, line 2071

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v1.core.OntologyClass \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

setDescription(value) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Source:

phenopackets/schema/v1/base_pb.js, line 1848

Parameters:

Name	Type	Description
`value`	string

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

setEvidenceList(valuenon-null) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Source:

phenopackets/schema/v1/base_pb.js, line 2108

Parameters:

Name	Type	Description
`value`	Array.<!proto.org.phenopackets.schema.v1.core.Evidence>

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

setModifiersList(valuenon-null) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Source:

phenopackets/schema/v1/base_pb.js, line 1959

Parameters:

Name	Type	Description
`value`	Array.<!proto.org.phenopackets.schema.v1.core.OntologyClass>

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

setNegated(value) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Source:

phenopackets/schema/v1/base_pb.js, line 1903

Parameters:

Name	Type	Description
`value`	boolean

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

setSeverity(value) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Source:

phenopackets/schema/v1/base_pb.js, line 1922

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v1.core.OntologyClass \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

setType(value) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Source:

phenopackets/schema/v1/base_pb.js, line 1867

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v1.core.OntologyClass \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

toObject(opt_includeInstanceopt) → (non-null) {Object}

Description:

Creates an object representation of this proto. Field names that are reserved in JavaScript and will be renamed to pb_name. Optional fields that are not set will be set to undefined. To access a reserved field use, foo.pb_, eg, foo.pb_default. For the list of reserved names please see: net/proto2/compiler/js/internal/generator.cc#kKeyword.

Source:

phenopackets/schema/v1/base_pb.js, line 1627

Parameters:

Name	Type	Attributes	Description
`opt_includeInstance`	boolean	<optional>	Deprecated. whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration

Returns:

Type: Object

(static) deserializeBinary(bytes) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Description:

Deserializes binary data (in protobuf wire format).

Source:

phenopackets/schema/v1/base_pb.js, line 1669

Parameters:

Name	Type	Description
`bytes`	jspb.ByteSource	The bytes to deserialize.

Returns:

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

(static) deserializeBinaryFromReader(msgnon-null, readernon-null) → (non-null) {proto.org.phenopackets.schema.v1.core.PhenotypicFeature}

Description:

Deserializes binary data (in protobuf wire format) from the given reader into the given message object.

Source:

phenopackets/schema/v1/base_pb.js, line 1683

Parameters:

Name	Type	Description
`msg`	proto.org.phenopackets.schema.v1.core.PhenotypicFeature	The message object to deserialize into.
`reader`	jspb.BinaryReader	The BinaryReader to use.

Returns:

Type: proto.org.phenopackets.schema.v1.core.PhenotypicFeature

(static) serializeBinaryToWriter(messagenon-null, writernon-null)

Description:

Serializes the given message to binary data (in protobuf wire format), writing to the given BinaryWriter.

Source:

phenopackets/schema/v1/base_pb.js, line 1760

Parameters:

Name	Type	Description
`message`	proto.org.phenopackets.schema.v1.core.PhenotypicFeature
`writer`	jspb.BinaryWriter

(static) toObject(includeInstance, msgnon-null) → (non-null) {Object}

Description:

Static version of the {@see toObject} method.

Source:

phenopackets/schema/v1/base_pb.js, line 1641

Parameters:

Name	Type	Description
`includeInstance`	boolean \| undefined	Deprecated. Whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration
`msg`	proto.org.phenopackets.schema.v1.core.PhenotypicFeature	The msg instance to transform.

Returns:

Type: Object