GenomicInterpretation

new GenomicInterpretation(opt_dataopt)

Description:

Generated by JsPbCodeGenerator.

Source:

phenopackets/schema/v1/interpretation_pb.js, line 87

Parameters:

Name	Type	Attributes	Description
`opt_data`	Array	<optional>	Optional initial data array, typically from a server response, or constructed directly in Javascript. The array is used in place and becomes part of the constructed object. It is not cloned. If no data is provided, the constructed object will be empty, but still valid.

Extends

jspb.Message

Members

(static) CallCase :number

Source:

phenopackets/schema/v1/interpretation_pb.js, line 732

Properties:

Name	Type	Description
`CALL_NOT_SET`	number
`GENE`	number
`VARIANT`	number

Type:

number

(static) Status :number

Source:

phenopackets/schema/v1/interpretation_pb.js, line 887

Properties:

Name	Type	Description
`UNKNOWN`	number
`REJECTED`	number
`CANDIDATE`	number
`CAUSATIVE`	number

Type:

number

(static) displayName

Source:

phenopackets/schema/v1/interpretation_pb.js, line 96

(private, static, constant) oneofGroups_

Description:

Oneof group definitions for this message. Each group defines the field numbers belonging to that group. When of these fields' value is set, all other fields in the group are cleared. During deserialization, if multiple fields are encountered for a group, only the last value seen will be kept.

Source:

phenopackets/schema/v1/interpretation_pb.js, line 727

Oneof group definitions for this message. Each group defines the field numbers belonging to that group. When of these fields' value is set, all other fields in the group are cleared. During deserialization, if multiple fields are encountered for a group, only the last value seen will be kept.

Methods

clearGene() → (non-null) {proto.org.phenopackets.schema.v1.GenomicInterpretation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v1/interpretation_pb.js, line 935

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.GenomicInterpretation

clearVariant() → (non-null) {proto.org.phenopackets.schema.v1.GenomicInterpretation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/schema/v1/interpretation_pb.js, line 972

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.GenomicInterpretation

getCallCase() → {proto.org.phenopackets.schema.v1.GenomicInterpretation.CallCase}

Source:

phenopackets/schema/v1/interpretation_pb.js, line 741

Returns:

Type: proto.org.phenopackets.schema.v1.GenomicInterpretation.CallCase

getGene() → (nullable) {proto.org.phenopackets.schema.v1.core.Gene}

Description:

optional core.Gene gene = 2;

Source:

phenopackets/schema/v1/interpretation_pb.js, line 916

Returns:

Type: proto.org.phenopackets.schema.v1.core.Gene

getStatus() → (non-null) {proto.org.phenopackets.schema.v1.GenomicInterpretation.Status}

Description:

optional Status status = 1;

Source:

phenopackets/schema/v1/interpretation_pb.js, line 898

Returns:

Type: proto.org.phenopackets.schema.v1.GenomicInterpretation.Status

getVariant() → (nullable) {proto.org.phenopackets.schema.v1.core.Variant}

Description:

optional core.Variant variant = 3;

Source:

phenopackets/schema/v1/interpretation_pb.js, line 953

Returns:

Type: proto.org.phenopackets.schema.v1.core.Variant

hasGene() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v1/interpretation_pb.js, line 944

Returns:

Type: boolean

hasVariant() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/schema/v1/interpretation_pb.js, line 981

Returns:

Type: boolean

serializeBinary() → (non-null) {Uint8Array}

Description:

Serializes the message to binary data (in protobuf wire format).

Source:

phenopackets/schema/v1/interpretation_pb.js, line 842

Returns:

Type: Uint8Array

setGene(value) → (non-null) {proto.org.phenopackets.schema.v1.GenomicInterpretation}

Source:

phenopackets/schema/v1/interpretation_pb.js, line 926

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v1.core.Gene \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.GenomicInterpretation

setStatus(valuenon-null) → (non-null) {proto.org.phenopackets.schema.v1.GenomicInterpretation}

Source:

phenopackets/schema/v1/interpretation_pb.js, line 907

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v1.GenomicInterpretation.Status

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.GenomicInterpretation

setVariant(value) → (non-null) {proto.org.phenopackets.schema.v1.GenomicInterpretation}

Source:

phenopackets/schema/v1/interpretation_pb.js, line 963

Parameters:

Name	Type	Description
`value`	proto.org.phenopackets.schema.v1.core.Variant \| undefined

Returns:

returns this

Type: proto.org.phenopackets.schema.v1.GenomicInterpretation

toObject(opt_includeInstanceopt) → (non-null) {Object}

Description:

Creates an object representation of this proto. Field names that are reserved in JavaScript and will be renamed to pb_name. Optional fields that are not set will be set to undefined. To access a reserved field use, foo.pb_, eg, foo.pb_default. For the list of reserved names please see: net/proto2/compiler/js/internal/generator.cc#kKeyword.

Source:

phenopackets/schema/v1/interpretation_pb.js, line 760

Parameters:

Name	Type	Attributes	Description
`opt_includeInstance`	boolean	<optional>	Deprecated. whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration

Returns:

Type: Object

(static) deserializeBinary(bytes) → (non-null) {proto.org.phenopackets.schema.v1.GenomicInterpretation}

Description:

Deserializes binary data (in protobuf wire format).

Source:

phenopackets/schema/v1/interpretation_pb.js, line 794

Parameters:

Name	Type	Description
`bytes`	jspb.ByteSource	The bytes to deserialize.

Returns:

Type: proto.org.phenopackets.schema.v1.GenomicInterpretation

(static) deserializeBinaryFromReader(msgnon-null, readernon-null) → (non-null) {proto.org.phenopackets.schema.v1.GenomicInterpretation}

Description:

Deserializes binary data (in protobuf wire format) from the given reader into the given message object.

Source:

phenopackets/schema/v1/interpretation_pb.js, line 808

Parameters:

Name	Type	Description
`msg`	proto.org.phenopackets.schema.v1.GenomicInterpretation	The message object to deserialize into.
`reader`	jspb.BinaryReader	The BinaryReader to use.

Returns:

Type: proto.org.phenopackets.schema.v1.GenomicInterpretation

(static) serializeBinaryToWriter(messagenon-null, writernon-null)

Description:

Serializes the given message to binary data (in protobuf wire format), writing to the given BinaryWriter.

Source:

phenopackets/schema/v1/interpretation_pb.js, line 856

Parameters:

Name	Type	Description
`message`	proto.org.phenopackets.schema.v1.GenomicInterpretation
`writer`	jspb.BinaryWriter

(static) toObject(includeInstance, msgnon-null) → (non-null) {Object}

Description:

Static version of the {@see toObject} method.

Source:

phenopackets/schema/v1/interpretation_pb.js, line 774

Parameters:

Name	Type	Description
`includeInstance`	boolean \| undefined	Deprecated. Whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration
`msg`	proto.org.phenopackets.schema.v1.GenomicInterpretation	The msg instance to transform.

Returns:

Type: Object