Variation

new Variation(opt_dataopt)

Description:

Generated by JsPbCodeGenerator.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 81

Parameters:

Name	Type	Attributes	Description
`opt_data`	Array	<optional>	Optional initial data array, typically from a server response, or constructed directly in Javascript. The array is used in place and becomes part of the constructed object. It is not cloned. If no data is provided, the constructed object will be empty, but still valid.

Extends

jspb.Message

Members

(static) VariationCase :number

Source:

phenopackets/vrs/v1/vrs_pb.js, line 673

Properties:

Name	Type	Description
`VARIATION_NOT_SET`	number
`ALLELE`	number
`HAPLOTYPE`	number
`COPY_NUMBER`	number
`TEXT`	number
`VARIATION_SET`	number

Type:

number

(static) VariationCase :number

Source:

schema/vrs_pb.js, line 664

Properties:

Name	Type	Description
`VARIATION_NOT_SET`	number
`ALLELE`	number
`HAPLOTYPE`	number
`COPY_NUMBER`	number
`TEXT`	number
`VARIATION_SET`	number

Type:

number

(static) displayName

Source:

phenopackets/vrs/v1/vrs_pb.js, line 90

(static) displayName

Source:

schema/vrs_pb.js, line 81

(private, static, constant) oneofGroups_

Description:

Oneof group definitions for this message. Each group defines the field numbers belonging to that group. When of these fields' value is set, all other fields in the group are cleared. During deserialization, if multiple fields are encountered for a group, only the last value seen will be kept.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 668

Oneof group definitions for this message. Each group defines the field numbers belonging to that group. When of these fields' value is set, all other fields in the group are cleared. During deserialization, if multiple fields are encountered for a group, only the last value seen will be kept.

(private, static, constant) oneofGroups_

Description:

Oneof group definitions for this message. Each group defines the field numbers belonging to that group. When of these fields' value is set, all other fields in the group are cleared. During deserialization, if multiple fields are encountered for a group, only the last value seen will be kept.

Source:

schema/vrs_pb.js, line 659

Methods

clearAllele() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 881

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearAllele() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

schema/vrs_pb.js, line 872

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearCopyNumber() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 955

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearCopyNumber() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

schema/vrs_pb.js, line 946

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearHaplotype() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 918

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearHaplotype() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

schema/vrs_pb.js, line 909

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearText() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 992

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearText() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

schema/vrs_pb.js, line 983

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearVariationSet() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 1029

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearVariationSet() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

schema/vrs_pb.js, line 1020

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

getAllele() → (nullable) {proto.org.ga4gh.vrs.v1.Allele}

Description:

optional Allele allele = 1;

Source:

phenopackets/vrs/v1/vrs_pb.js, line 862

Returns:

Type: proto.org.ga4gh.vrs.v1.Allele

getAllele() → (nullable) {proto.org.ga4gh.vrs.v1.Allele}

Description:

optional Allele allele = 1;

Source:

schema/vrs_pb.js, line 853

Returns:

Type: proto.org.ga4gh.vrs.v1.Allele

getCopyNumber() → (nullable) {proto.org.ga4gh.vrs.v1.CopyNumber}

Description:

optional CopyNumber copy_number = 3;

Source:

phenopackets/vrs/v1/vrs_pb.js, line 936

Returns:

Type: proto.org.ga4gh.vrs.v1.CopyNumber

getCopyNumber() → (nullable) {proto.org.ga4gh.vrs.v1.CopyNumber}

Description:

optional CopyNumber copy_number = 3;

Source:

schema/vrs_pb.js, line 927

Returns:

Type: proto.org.ga4gh.vrs.v1.CopyNumber

getHaplotype() → (nullable) {proto.org.ga4gh.vrs.v1.Haplotype}

Description:

optional Haplotype haplotype = 2;

Source:

phenopackets/vrs/v1/vrs_pb.js, line 899

Returns:

Type: proto.org.ga4gh.vrs.v1.Haplotype

getHaplotype() → (nullable) {proto.org.ga4gh.vrs.v1.Haplotype}

Description:

optional Haplotype haplotype = 2;

Source:

schema/vrs_pb.js, line 890

Returns:

Type: proto.org.ga4gh.vrs.v1.Haplotype

getText() → (nullable) {proto.org.ga4gh.vrs.v1.Text}

Description:

optional Text text = 4;

Source:

phenopackets/vrs/v1/vrs_pb.js, line 973

Returns:

Type: proto.org.ga4gh.vrs.v1.Text

getText() → (nullable) {proto.org.ga4gh.vrs.v1.Text}

Description:

optional Text text = 4;

Source:

schema/vrs_pb.js, line 964

Returns:

Type: proto.org.ga4gh.vrs.v1.Text

getVariationCase() → {proto.org.ga4gh.vrs.v1.Variation.VariationCase}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 685

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation.VariationCase

getVariationCase() → {proto.org.ga4gh.vrs.v1.Variation.VariationCase}

Source:

schema/vrs_pb.js, line 676

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation.VariationCase

getVariationSet() → (nullable) {proto.org.ga4gh.vrs.v1.VariationSet}

Description:

optional VariationSet variation_set = 5;

Source:

phenopackets/vrs/v1/vrs_pb.js, line 1010

Returns:

Type: proto.org.ga4gh.vrs.v1.VariationSet

getVariationSet() → (nullable) {proto.org.ga4gh.vrs.v1.VariationSet}

Description:

optional VariationSet variation_set = 5;

Source:

schema/vrs_pb.js, line 1001

Returns:

Type: proto.org.ga4gh.vrs.v1.VariationSet

hasAllele() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 890

Returns:

Type: boolean

hasAllele() → {boolean}

Description:

Returns whether this field is set.

Source:

schema/vrs_pb.js, line 881

Returns:

Type: boolean

hasCopyNumber() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 964

Returns:

Type: boolean

hasCopyNumber() → {boolean}

Description:

Returns whether this field is set.

Source:

schema/vrs_pb.js, line 955

Returns:

Type: boolean

hasHaplotype() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 927

Returns:

Type: boolean

hasHaplotype() → {boolean}

Description:

Returns whether this field is set.

Source:

schema/vrs_pb.js, line 918

Returns:

Type: boolean

hasText() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 1001

Returns:

Type: boolean

hasText() → {boolean}

Description:

Returns whether this field is set.

Source:

schema/vrs_pb.js, line 992

Returns:

Type: boolean

hasVariationSet() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 1038

Returns:

Type: boolean

hasVariationSet() → {boolean}

Description:

Returns whether this field is set.

Source:

schema/vrs_pb.js, line 1029

Returns:

Type: boolean

serializeBinary() → (non-null) {Uint8Array}

Description:

Serializes the message to binary data (in protobuf wire format).

Source:

phenopackets/vrs/v1/vrs_pb.js, line 799

Returns:

Type: Uint8Array

serializeBinary() → (non-null) {Uint8Array}

Description:

Serializes the message to binary data (in protobuf wire format).

Source:

schema/vrs_pb.js, line 790

Returns:

Type: Uint8Array

setAllele(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 872

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Allele \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setAllele(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

schema/vrs_pb.js, line 863

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Allele \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setCopyNumber(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 946

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.CopyNumber \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setCopyNumber(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

schema/vrs_pb.js, line 937

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.CopyNumber \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setHaplotype(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 909

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Haplotype \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setHaplotype(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

schema/vrs_pb.js, line 900

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Haplotype \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setText(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 983

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Text \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setText(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

schema/vrs_pb.js, line 974

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Text \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setVariationSet(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 1020

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.VariationSet \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setVariationSet(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

schema/vrs_pb.js, line 1011

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.VariationSet \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

toObject(opt_includeInstanceopt) → (non-null) {Object}

Description:

Creates an object representation of this proto. Field names that are reserved in JavaScript and will be renamed to pb_name. Optional fields that are not set will be set to undefined. To access a reserved field use, foo.pb_, eg, foo.pb_default. For the list of reserved names please see: net/proto2/compiler/js/internal/generator.cc#kKeyword.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 704

Parameters:

Name	Type	Attributes	Description
`opt_includeInstance`	boolean	<optional>	Deprecated. whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration

Returns:

Type: Object

toObject(opt_includeInstanceopt) → (non-null) {Object}

Description:

Creates an object representation of this proto. Field names that are reserved in JavaScript and will be renamed to pb_name. Optional fields that are not set will be set to undefined. To access a reserved field use, foo.pb_, eg, foo.pb_default. For the list of reserved names please see: net/proto2/compiler/js/internal/generator.cc#kKeyword.

Source:

schema/vrs_pb.js, line 695

Parameters:

Name	Type	Attributes	Description
`opt_includeInstance`	boolean	<optional>	Deprecated. whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration

Returns:

Type: Object

(static) deserializeBinary(bytes) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Deserializes binary data (in protobuf wire format).

Source:

phenopackets/vrs/v1/vrs_pb.js, line 740

Parameters:

Name	Type	Description
`bytes`	jspb.ByteSource	The bytes to deserialize.

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation

(static) deserializeBinary(bytes) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Deserializes binary data (in protobuf wire format).

Source:

schema/vrs_pb.js, line 731

Parameters:

Name	Type	Description
`bytes`	jspb.ByteSource	The bytes to deserialize.

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation

(static) deserializeBinaryFromReader(msgnon-null, readernon-null) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Deserializes binary data (in protobuf wire format) from the given reader into the given message object.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 754

Parameters:

Name	Type	Description
`msg`	proto.org.ga4gh.vrs.v1.Variation	The message object to deserialize into.
`reader`	jspb.BinaryReader	The BinaryReader to use.

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation

(static) deserializeBinaryFromReader(msgnon-null, readernon-null) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Deserializes binary data (in protobuf wire format) from the given reader into the given message object.

Source:

schema/vrs_pb.js, line 745

Parameters:

Name	Type	Description
`msg`	proto.org.ga4gh.vrs.v1.Variation	The message object to deserialize into.
`reader`	jspb.BinaryReader	The BinaryReader to use.

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation

(static) serializeBinaryToWriter(messagenon-null, writernon-null)

Description:

Serializes the given message to binary data (in protobuf wire format), writing to the given BinaryWriter.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 813

Parameters:

Name	Type	Description
`message`	proto.org.ga4gh.vrs.v1.Variation
`writer`	jspb.BinaryWriter

(static) serializeBinaryToWriter(messagenon-null, writernon-null)

Description:

Serializes the given message to binary data (in protobuf wire format), writing to the given BinaryWriter.

Source:

schema/vrs_pb.js, line 804

Parameters:

Name	Type	Description
`message`	proto.org.ga4gh.vrs.v1.Variation
`writer`	jspb.BinaryWriter

(static) toObject(includeInstance, msgnon-null) → (non-null) {Object}

Description:

Static version of the {@see toObject} method.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 718

Parameters:

Name	Type	Description
`includeInstance`	boolean \| undefined	Deprecated. Whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration
`msg`	proto.org.ga4gh.vrs.v1.Variation	The msg instance to transform.

Returns:

Type: Object

(static) toObject(includeInstance, msgnon-null) → (non-null) {Object}

Description:

Static version of the {@see toObject} method.

Source:

schema/vrs_pb.js, line 709

Parameters:

Name	Type	Description
`includeInstance`	boolean \| undefined	Deprecated. Whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration
`msg`	proto.org.ga4gh.vrs.v1.Variation	The msg instance to transform.

Returns:

Type: Object

Variation

new Variation(opt_dataopt)

Description:

Generated by JsPbCodeGenerator.

Source:

schema/vrs_pb.js, line 72

Parameters:

Name	Type	Attributes	Description
`opt_data`	Array	<optional>	Optional initial data array, typically from a server response, or constructed directly in Javascript. The array is used in place and becomes part of the constructed object. It is not cloned. If no data is provided, the constructed object will be empty, but still valid.

Extends

jspb.Message

Members

(static) VariationCase :number

Source:

phenopackets/vrs/v1/vrs_pb.js, line 673

Properties:

Name	Type	Description
`VARIATION_NOT_SET`	number
`ALLELE`	number
`HAPLOTYPE`	number
`COPY_NUMBER`	number
`TEXT`	number
`VARIATION_SET`	number

Type:

number

(static) VariationCase :number

Source:

schema/vrs_pb.js, line 664

Properties:

Name	Type	Description
`VARIATION_NOT_SET`	number
`ALLELE`	number
`HAPLOTYPE`	number
`COPY_NUMBER`	number
`TEXT`	number
`VARIATION_SET`	number

Type:

number

(static) displayName

Source:

phenopackets/vrs/v1/vrs_pb.js, line 90

(static) displayName

Source:

schema/vrs_pb.js, line 81

(private, static, constant) oneofGroups_

Description:

Oneof group definitions for this message. Each group defines the field numbers belonging to that group. When of these fields' value is set, all other fields in the group are cleared. During deserialization, if multiple fields are encountered for a group, only the last value seen will be kept.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 668

(private, static, constant) oneofGroups_

Description:

Oneof group definitions for this message. Each group defines the field numbers belonging to that group. When of these fields' value is set, all other fields in the group are cleared. During deserialization, if multiple fields are encountered for a group, only the last value seen will be kept.

Source:

schema/vrs_pb.js, line 659

Methods

clearAllele() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 881

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearAllele() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

schema/vrs_pb.js, line 872

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearCopyNumber() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 955

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearCopyNumber() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

schema/vrs_pb.js, line 946

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearHaplotype() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 918

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearHaplotype() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

schema/vrs_pb.js, line 909

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearText() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 992

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearText() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

schema/vrs_pb.js, line 983

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearVariationSet() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 1029

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

clearVariationSet() → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Clears the message field making it undefined.

Source:

schema/vrs_pb.js, line 1020

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

getAllele() → (nullable) {proto.org.ga4gh.vrs.v1.Allele}

Description:

optional Allele allele = 1;

Source:

phenopackets/vrs/v1/vrs_pb.js, line 862

Returns:

Type: proto.org.ga4gh.vrs.v1.Allele

getAllele() → (nullable) {proto.org.ga4gh.vrs.v1.Allele}

Description:

optional Allele allele = 1;

Source:

schema/vrs_pb.js, line 853

Returns:

Type: proto.org.ga4gh.vrs.v1.Allele

getCopyNumber() → (nullable) {proto.org.ga4gh.vrs.v1.CopyNumber}

Description:

optional CopyNumber copy_number = 3;

Source:

phenopackets/vrs/v1/vrs_pb.js, line 936

Returns:

Type: proto.org.ga4gh.vrs.v1.CopyNumber

getCopyNumber() → (nullable) {proto.org.ga4gh.vrs.v1.CopyNumber}

Description:

optional CopyNumber copy_number = 3;

Source:

schema/vrs_pb.js, line 927

Returns:

Type: proto.org.ga4gh.vrs.v1.CopyNumber

getHaplotype() → (nullable) {proto.org.ga4gh.vrs.v1.Haplotype}

Description:

optional Haplotype haplotype = 2;

Source:

phenopackets/vrs/v1/vrs_pb.js, line 899

Returns:

Type: proto.org.ga4gh.vrs.v1.Haplotype

getHaplotype() → (nullable) {proto.org.ga4gh.vrs.v1.Haplotype}

Description:

optional Haplotype haplotype = 2;

Source:

schema/vrs_pb.js, line 890

Returns:

Type: proto.org.ga4gh.vrs.v1.Haplotype

getText() → (nullable) {proto.org.ga4gh.vrs.v1.Text}

Description:

optional Text text = 4;

Source:

phenopackets/vrs/v1/vrs_pb.js, line 973

Returns:

Type: proto.org.ga4gh.vrs.v1.Text

getText() → (nullable) {proto.org.ga4gh.vrs.v1.Text}

Description:

optional Text text = 4;

Source:

schema/vrs_pb.js, line 964

Returns:

Type: proto.org.ga4gh.vrs.v1.Text

getVariationCase() → {proto.org.ga4gh.vrs.v1.Variation.VariationCase}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 685

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation.VariationCase

getVariationCase() → {proto.org.ga4gh.vrs.v1.Variation.VariationCase}

Source:

schema/vrs_pb.js, line 676

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation.VariationCase

getVariationSet() → (nullable) {proto.org.ga4gh.vrs.v1.VariationSet}

Description:

optional VariationSet variation_set = 5;

Source:

phenopackets/vrs/v1/vrs_pb.js, line 1010

Returns:

Type: proto.org.ga4gh.vrs.v1.VariationSet

getVariationSet() → (nullable) {proto.org.ga4gh.vrs.v1.VariationSet}

Description:

optional VariationSet variation_set = 5;

Source:

schema/vrs_pb.js, line 1001

Returns:

Type: proto.org.ga4gh.vrs.v1.VariationSet

hasAllele() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 890

Returns:

Type: boolean

hasAllele() → {boolean}

Description:

Returns whether this field is set.

Source:

schema/vrs_pb.js, line 881

Returns:

Type: boolean

hasCopyNumber() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 964

Returns:

Type: boolean

hasCopyNumber() → {boolean}

Description:

Returns whether this field is set.

Source:

schema/vrs_pb.js, line 955

Returns:

Type: boolean

hasHaplotype() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 927

Returns:

Type: boolean

hasHaplotype() → {boolean}

Description:

Returns whether this field is set.

Source:

schema/vrs_pb.js, line 918

Returns:

Type: boolean

hasText() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 1001

Returns:

Type: boolean

hasText() → {boolean}

Description:

Returns whether this field is set.

Source:

schema/vrs_pb.js, line 992

Returns:

Type: boolean

hasVariationSet() → {boolean}

Description:

Returns whether this field is set.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 1038

Returns:

Type: boolean

hasVariationSet() → {boolean}

Description:

Returns whether this field is set.

Source:

schema/vrs_pb.js, line 1029

Returns:

Type: boolean

serializeBinary() → (non-null) {Uint8Array}

Description:

Serializes the message to binary data (in protobuf wire format).

Source:

phenopackets/vrs/v1/vrs_pb.js, line 799

Returns:

Type: Uint8Array

serializeBinary() → (non-null) {Uint8Array}

Description:

Serializes the message to binary data (in protobuf wire format).

Source:

schema/vrs_pb.js, line 790

Returns:

Type: Uint8Array

setAllele(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 872

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Allele \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setAllele(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

schema/vrs_pb.js, line 863

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Allele \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setCopyNumber(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 946

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.CopyNumber \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setCopyNumber(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

schema/vrs_pb.js, line 937

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.CopyNumber \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setHaplotype(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 909

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Haplotype \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setHaplotype(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

schema/vrs_pb.js, line 900

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Haplotype \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setText(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 983

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Text \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setText(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

schema/vrs_pb.js, line 974

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.Text \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setVariationSet(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

phenopackets/vrs/v1/vrs_pb.js, line 1020

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.VariationSet \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

setVariationSet(value) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Source:

schema/vrs_pb.js, line 1011

Parameters:

Name	Type	Description
`value`	proto.org.ga4gh.vrs.v1.VariationSet \| undefined

Returns:

returns this

Type: proto.org.ga4gh.vrs.v1.Variation

toObject(opt_includeInstanceopt) → (non-null) {Object}

Description:

Creates an object representation of this proto. Field names that are reserved in JavaScript and will be renamed to pb_name. Optional fields that are not set will be set to undefined. To access a reserved field use, foo.pb_, eg, foo.pb_default. For the list of reserved names please see: net/proto2/compiler/js/internal/generator.cc#kKeyword.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 704

Parameters:

Name	Type	Attributes	Description
`opt_includeInstance`	boolean	<optional>	Deprecated. whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration

Returns:

Type: Object

toObject(opt_includeInstanceopt) → (non-null) {Object}

Description:

Creates an object representation of this proto. Field names that are reserved in JavaScript and will be renamed to pb_name. Optional fields that are not set will be set to undefined. To access a reserved field use, foo.pb_, eg, foo.pb_default. For the list of reserved names please see: net/proto2/compiler/js/internal/generator.cc#kKeyword.

Source:

schema/vrs_pb.js, line 695

Parameters:

Name	Type	Attributes	Description
`opt_includeInstance`	boolean	<optional>	Deprecated. whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration

Returns:

Type: Object

(static) deserializeBinary(bytes) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Deserializes binary data (in protobuf wire format).

Source:

phenopackets/vrs/v1/vrs_pb.js, line 740

Parameters:

Name	Type	Description
`bytes`	jspb.ByteSource	The bytes to deserialize.

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation

(static) deserializeBinary(bytes) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Deserializes binary data (in protobuf wire format).

Source:

schema/vrs_pb.js, line 731

Parameters:

Name	Type	Description
`bytes`	jspb.ByteSource	The bytes to deserialize.

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation

(static) deserializeBinaryFromReader(msgnon-null, readernon-null) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Deserializes binary data (in protobuf wire format) from the given reader into the given message object.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 754

Parameters:

Name	Type	Description
`msg`	proto.org.ga4gh.vrs.v1.Variation	The message object to deserialize into.
`reader`	jspb.BinaryReader	The BinaryReader to use.

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation

(static) deserializeBinaryFromReader(msgnon-null, readernon-null) → (non-null) {proto.org.ga4gh.vrs.v1.Variation}

Description:

Deserializes binary data (in protobuf wire format) from the given reader into the given message object.

Source:

schema/vrs_pb.js, line 745

Parameters:

Name	Type	Description
`msg`	proto.org.ga4gh.vrs.v1.Variation	The message object to deserialize into.
`reader`	jspb.BinaryReader	The BinaryReader to use.

Returns:

Type: proto.org.ga4gh.vrs.v1.Variation

(static) serializeBinaryToWriter(messagenon-null, writernon-null)

Description:

Serializes the given message to binary data (in protobuf wire format), writing to the given BinaryWriter.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 813

Parameters:

Name	Type	Description
`message`	proto.org.ga4gh.vrs.v1.Variation
`writer`	jspb.BinaryWriter

(static) serializeBinaryToWriter(messagenon-null, writernon-null)

Description:

Serializes the given message to binary data (in protobuf wire format), writing to the given BinaryWriter.

Source:

schema/vrs_pb.js, line 804

Parameters:

Name	Type	Description
`message`	proto.org.ga4gh.vrs.v1.Variation
`writer`	jspb.BinaryWriter

(static) toObject(includeInstance, msgnon-null) → (non-null) {Object}

Description:

Static version of the {@see toObject} method.

Source:

phenopackets/vrs/v1/vrs_pb.js, line 718

Parameters:

Name	Type	Description
`includeInstance`	boolean \| undefined	Deprecated. Whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration
`msg`	proto.org.ga4gh.vrs.v1.Variation	The msg instance to transform.

Returns:

Type: Object

(static) toObject(includeInstance, msgnon-null) → (non-null) {Object}

Description:

Static version of the {@see toObject} method.

Source:

schema/vrs_pb.js, line 709

Parameters:

Name	Type	Description
`includeInstance`	boolean \| undefined	Deprecated. Whether to include the JSPB instance for transitional soy proto support: http://goto/soy-param-migration
`msg`	proto.org.ga4gh.vrs.v1.Variation	The msg instance to transform.

Returns:

Type: Object