// source: phenopackets/schema/v2/core/pedigree.proto
/**
* @fileoverview
* @enhanceable
* @suppress {missingRequire} reports error on implicit type usages.
* @suppress {messageConventions} JS Compiler reports an error if a variable or
* field starts with 'MSG_' and isn't a translatable message.
* @public
*/
// GENERATED CODE -- DO NOT EDIT!
/* eslint-disable */
// @ts-nocheck
var jspb = require('google-protobuf');
var goog = jspb;
var global =
(typeof globalThis !== 'undefined' && globalThis) ||
(typeof window !== 'undefined' && window) ||
(typeof global !== 'undefined' && global) ||
(typeof self !== 'undefined' && self) ||
(function () { return this; }).call(null) ||
Function('return this')();
var phenopackets_schema_v2_core_individual_pb = require('../../../../phenopackets/schema/v2/core/individual_pb.js');
goog.object.extend(proto, phenopackets_schema_v2_core_individual_pb);
goog.exportSymbol('proto.org.phenopackets.schema.v2.core.Pedigree', null, global);
goog.exportSymbol('proto.org.phenopackets.schema.v2.core.Pedigree.Person', null, global);
goog.exportSymbol('proto.org.phenopackets.schema.v2.core.Pedigree.Person.AffectedStatus', null, global);
/**
* Generated by JsPbCodeGenerator.
* @param {Array=} opt_data Optional initial data array, typically from a
* server response, or constructed directly in Javascript. The array is used
* in place and becomes part of the constructed object. It is not cloned.
* If no data is provided, the constructed object will be empty, but still
* valid.
* @extends {jspb.Message}
* @constructor
*/
proto.org.phenopackets.schema.v2.core.Pedigree = function(opt_data) {
jspb.Message.initialize(this, opt_data, 0, -1, proto.org.phenopackets.schema.v2.core.Pedigree.repeatedFields_, null);
};
goog.inherits(proto.org.phenopackets.schema.v2.core.Pedigree, jspb.Message);
if (goog.DEBUG && !COMPILED) {
/**
* @public
* @override
*/
proto.org.phenopackets.schema.v2.core.Pedigree.displayName = 'proto.org.phenopackets.schema.v2.core.Pedigree';
}
/**
* Generated by JsPbCodeGenerator.
* @param {Array=} opt_data Optional initial data array, typically from a
* server response, or constructed directly in Javascript. The array is used
* in place and becomes part of the constructed object. It is not cloned.
* If no data is provided, the constructed object will be empty, but still
* valid.
* @extends {jspb.Message}
* @constructor
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person = function(opt_data) {
jspb.Message.initialize(this, opt_data, 0, -1, null, null);
};
goog.inherits(proto.org.phenopackets.schema.v2.core.Pedigree.Person, jspb.Message);
if (goog.DEBUG && !COMPILED) {
/**
* @public
* @override
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.displayName = 'proto.org.phenopackets.schema.v2.core.Pedigree.Person';
}
/**
* List of repeated fields within this message type.
* @private {!Array<number>}
* @const
*/
proto.org.phenopackets.schema.v2.core.Pedigree.repeatedFields_ = [1];
if (jspb.Message.GENERATE_TO_OBJECT) {
/**
* Creates an object representation of this proto.
* Field names that are reserved in JavaScript and will be renamed to pb_name.
* Optional fields that are not set will be set to undefined.
* To access a reserved field use, foo.pb_<name>, eg, foo.pb_default.
* For the list of reserved names please see:
* net/proto2/compiler/js/internal/generator.cc#kKeyword.
* @param {boolean=} opt_includeInstance Deprecated. whether to include the
* JSPB instance for transitional soy proto support:
* http://goto/soy-param-migration
* @return {!Object}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.prototype.toObject = function(opt_includeInstance) {
return proto.org.phenopackets.schema.v2.core.Pedigree.toObject(opt_includeInstance, this);
};
/**
* Static version of the {@see toObject} method.
* @param {boolean|undefined} includeInstance Deprecated. Whether to include
* the JSPB instance for transitional soy proto support:
* http://goto/soy-param-migration
* @param {!proto.org.phenopackets.schema.v2.core.Pedigree} msg The msg instance to transform.
* @return {!Object}
* @suppress {unusedLocalVariables} f is only used for nested messages
*/
proto.org.phenopackets.schema.v2.core.Pedigree.toObject = function(includeInstance, msg) {
var f, obj = {
personsList: jspb.Message.toObjectList(msg.getPersonsList(),
proto.org.phenopackets.schema.v2.core.Pedigree.Person.toObject, includeInstance)
};
if (includeInstance) {
obj.$jspbMessageInstance = msg;
}
return obj;
};
}
/**
* Deserializes binary data (in protobuf wire format).
* @param {jspb.ByteSource} bytes The bytes to deserialize.
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.deserializeBinary = function(bytes) {
var reader = new jspb.BinaryReader(bytes);
var msg = new proto.org.phenopackets.schema.v2.core.Pedigree;
return proto.org.phenopackets.schema.v2.core.Pedigree.deserializeBinaryFromReader(msg, reader);
};
/**
* Deserializes binary data (in protobuf wire format) from the
* given reader into the given message object.
* @param {!proto.org.phenopackets.schema.v2.core.Pedigree} msg The message object to deserialize into.
* @param {!jspb.BinaryReader} reader The BinaryReader to use.
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.deserializeBinaryFromReader = function(msg, reader) {
while (reader.nextField()) {
if (reader.isEndGroup()) {
break;
}
var field = reader.getFieldNumber();
switch (field) {
case 1:
var value = new proto.org.phenopackets.schema.v2.core.Pedigree.Person;
reader.readMessage(value,proto.org.phenopackets.schema.v2.core.Pedigree.Person.deserializeBinaryFromReader);
msg.addPersons(value);
break;
default:
reader.skipField();
break;
}
}
return msg;
};
/**
* Serializes the message to binary data (in protobuf wire format).
* @return {!Uint8Array}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.prototype.serializeBinary = function() {
var writer = new jspb.BinaryWriter();
proto.org.phenopackets.schema.v2.core.Pedigree.serializeBinaryToWriter(this, writer);
return writer.getResultBuffer();
};
/**
* Serializes the given message to binary data (in protobuf wire
* format), writing to the given BinaryWriter.
* @param {!proto.org.phenopackets.schema.v2.core.Pedigree} message
* @param {!jspb.BinaryWriter} writer
* @suppress {unusedLocalVariables} f is only used for nested messages
*/
proto.org.phenopackets.schema.v2.core.Pedigree.serializeBinaryToWriter = function(message, writer) {
var f = undefined;
f = message.getPersonsList();
if (f.length > 0) {
writer.writeRepeatedMessage(
1,
f,
proto.org.phenopackets.schema.v2.core.Pedigree.Person.serializeBinaryToWriter
);
}
};
if (jspb.Message.GENERATE_TO_OBJECT) {
/**
* Creates an object representation of this proto.
* Field names that are reserved in JavaScript and will be renamed to pb_name.
* Optional fields that are not set will be set to undefined.
* To access a reserved field use, foo.pb_<name>, eg, foo.pb_default.
* For the list of reserved names please see:
* net/proto2/compiler/js/internal/generator.cc#kKeyword.
* @param {boolean=} opt_includeInstance Deprecated. whether to include the
* JSPB instance for transitional soy proto support:
* http://goto/soy-param-migration
* @return {!Object}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.toObject = function(opt_includeInstance) {
return proto.org.phenopackets.schema.v2.core.Pedigree.Person.toObject(opt_includeInstance, this);
};
/**
* Static version of the {@see toObject} method.
* @param {boolean|undefined} includeInstance Deprecated. Whether to include
* the JSPB instance for transitional soy proto support:
* http://goto/soy-param-migration
* @param {!proto.org.phenopackets.schema.v2.core.Pedigree.Person} msg The msg instance to transform.
* @return {!Object}
* @suppress {unusedLocalVariables} f is only used for nested messages
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.toObject = function(includeInstance, msg) {
var f, obj = {
familyId: jspb.Message.getFieldWithDefault(msg, 1, ""),
individualId: jspb.Message.getFieldWithDefault(msg, 2, ""),
paternalId: jspb.Message.getFieldWithDefault(msg, 3, ""),
maternalId: jspb.Message.getFieldWithDefault(msg, 4, ""),
sex: jspb.Message.getFieldWithDefault(msg, 5, 0),
affectedStatus: jspb.Message.getFieldWithDefault(msg, 6, 0)
};
if (includeInstance) {
obj.$jspbMessageInstance = msg;
}
return obj;
};
}
/**
* Deserializes binary data (in protobuf wire format).
* @param {jspb.ByteSource} bytes The bytes to deserialize.
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree.Person}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.deserializeBinary = function(bytes) {
var reader = new jspb.BinaryReader(bytes);
var msg = new proto.org.phenopackets.schema.v2.core.Pedigree.Person;
return proto.org.phenopackets.schema.v2.core.Pedigree.Person.deserializeBinaryFromReader(msg, reader);
};
/**
* Deserializes binary data (in protobuf wire format) from the
* given reader into the given message object.
* @param {!proto.org.phenopackets.schema.v2.core.Pedigree.Person} msg The message object to deserialize into.
* @param {!jspb.BinaryReader} reader The BinaryReader to use.
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree.Person}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.deserializeBinaryFromReader = function(msg, reader) {
while (reader.nextField()) {
if (reader.isEndGroup()) {
break;
}
var field = reader.getFieldNumber();
switch (field) {
case 1:
var value = /** @type {string} */ (reader.readString());
msg.setFamilyId(value);
break;
case 2:
var value = /** @type {string} */ (reader.readString());
msg.setIndividualId(value);
break;
case 3:
var value = /** @type {string} */ (reader.readString());
msg.setPaternalId(value);
break;
case 4:
var value = /** @type {string} */ (reader.readString());
msg.setMaternalId(value);
break;
case 5:
var value = /** @type {!proto.org.phenopackets.schema.v2.core.Sex} */ (reader.readEnum());
msg.setSex(value);
break;
case 6:
var value = /** @type {!proto.org.phenopackets.schema.v2.core.Pedigree.Person.AffectedStatus} */ (reader.readEnum());
msg.setAffectedStatus(value);
break;
default:
reader.skipField();
break;
}
}
return msg;
};
/**
* Serializes the message to binary data (in protobuf wire format).
* @return {!Uint8Array}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.serializeBinary = function() {
var writer = new jspb.BinaryWriter();
proto.org.phenopackets.schema.v2.core.Pedigree.Person.serializeBinaryToWriter(this, writer);
return writer.getResultBuffer();
};
/**
* Serializes the given message to binary data (in protobuf wire
* format), writing to the given BinaryWriter.
* @param {!proto.org.phenopackets.schema.v2.core.Pedigree.Person} message
* @param {!jspb.BinaryWriter} writer
* @suppress {unusedLocalVariables} f is only used for nested messages
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.serializeBinaryToWriter = function(message, writer) {
var f = undefined;
f = message.getFamilyId();
if (f.length > 0) {
writer.writeString(
1,
f
);
}
f = message.getIndividualId();
if (f.length > 0) {
writer.writeString(
2,
f
);
}
f = message.getPaternalId();
if (f.length > 0) {
writer.writeString(
3,
f
);
}
f = message.getMaternalId();
if (f.length > 0) {
writer.writeString(
4,
f
);
}
f = message.getSex();
if (f !== 0.0) {
writer.writeEnum(
5,
f
);
}
f = message.getAffectedStatus();
if (f !== 0.0) {
writer.writeEnum(
6,
f
);
}
};
/**
* @enum {number}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.AffectedStatus = {
MISSING: 0,
UNAFFECTED: 1,
AFFECTED: 2
};
/**
* optional string family_id = 1;
* @return {string}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.getFamilyId = function() {
return /** @type {string} */ (jspb.Message.getFieldWithDefault(this, 1, ""));
};
/**
* @param {string} value
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree.Person} returns this
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.setFamilyId = function(value) {
return jspb.Message.setProto3StringField(this, 1, value);
};
/**
* optional string individual_id = 2;
* @return {string}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.getIndividualId = function() {
return /** @type {string} */ (jspb.Message.getFieldWithDefault(this, 2, ""));
};
/**
* @param {string} value
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree.Person} returns this
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.setIndividualId = function(value) {
return jspb.Message.setProto3StringField(this, 2, value);
};
/**
* optional string paternal_id = 3;
* @return {string}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.getPaternalId = function() {
return /** @type {string} */ (jspb.Message.getFieldWithDefault(this, 3, ""));
};
/**
* @param {string} value
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree.Person} returns this
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.setPaternalId = function(value) {
return jspb.Message.setProto3StringField(this, 3, value);
};
/**
* optional string maternal_id = 4;
* @return {string}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.getMaternalId = function() {
return /** @type {string} */ (jspb.Message.getFieldWithDefault(this, 4, ""));
};
/**
* @param {string} value
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree.Person} returns this
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.setMaternalId = function(value) {
return jspb.Message.setProto3StringField(this, 4, value);
};
/**
* optional Sex sex = 5;
* @return {!proto.org.phenopackets.schema.v2.core.Sex}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.getSex = function() {
return /** @type {!proto.org.phenopackets.schema.v2.core.Sex} */ (jspb.Message.getFieldWithDefault(this, 5, 0));
};
/**
* @param {!proto.org.phenopackets.schema.v2.core.Sex} value
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree.Person} returns this
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.setSex = function(value) {
return jspb.Message.setProto3EnumField(this, 5, value);
};
/**
* optional AffectedStatus affected_status = 6;
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree.Person.AffectedStatus}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.getAffectedStatus = function() {
return /** @type {!proto.org.phenopackets.schema.v2.core.Pedigree.Person.AffectedStatus} */ (jspb.Message.getFieldWithDefault(this, 6, 0));
};
/**
* @param {!proto.org.phenopackets.schema.v2.core.Pedigree.Person.AffectedStatus} value
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree.Person} returns this
*/
proto.org.phenopackets.schema.v2.core.Pedigree.Person.prototype.setAffectedStatus = function(value) {
return jspb.Message.setProto3EnumField(this, 6, value);
};
/**
* repeated Person persons = 1;
* @return {!Array<!proto.org.phenopackets.schema.v2.core.Pedigree.Person>}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.prototype.getPersonsList = function() {
return /** @type{!Array<!proto.org.phenopackets.schema.v2.core.Pedigree.Person>} */ (
jspb.Message.getRepeatedWrapperField(this, proto.org.phenopackets.schema.v2.core.Pedigree.Person, 1));
};
/**
* @param {!Array<!proto.org.phenopackets.schema.v2.core.Pedigree.Person>} value
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree} returns this
*/
proto.org.phenopackets.schema.v2.core.Pedigree.prototype.setPersonsList = function(value) {
return jspb.Message.setRepeatedWrapperField(this, 1, value);
};
/**
* @param {!proto.org.phenopackets.schema.v2.core.Pedigree.Person=} opt_value
* @param {number=} opt_index
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree.Person}
*/
proto.org.phenopackets.schema.v2.core.Pedigree.prototype.addPersons = function(opt_value, opt_index) {
return jspb.Message.addToRepeatedWrapperField(this, 1, opt_value, proto.org.phenopackets.schema.v2.core.Pedigree.Person, opt_index);
};
/**
* Clears the list making it empty but non-null.
* @return {!proto.org.phenopackets.schema.v2.core.Pedigree} returns this
*/
proto.org.phenopackets.schema.v2.core.Pedigree.prototype.clearPersonsList = function() {
return this.setPersonsList([]);
};
goog.object.extend(exports, proto.org.phenopackets.schema.v2.core);