// source: phenopackets/schema/v2/core/individual.proto
/**
* @fileoverview
* @enhanceable
* @suppress {missingRequire} reports error on implicit type usages.
* @suppress {messageConventions} JS Compiler reports an error if a variable or
* field starts with 'MSG_' and isn't a translatable message.
* @public
*/
// GENERATED CODE -- DO NOT EDIT!
/* eslint-disable */
// @ts-nocheck
var jspb = require('google-protobuf');
var goog = jspb;
var global =
(typeof globalThis !== 'undefined' && globalThis) ||
(typeof window !== 'undefined' && window) ||
(typeof global !== 'undefined' && global) ||
(typeof self !== 'undefined' && self) ||
(function () { return this; }).call(null) ||
Function('return this')();
var google_protobuf_timestamp_pb = require('google-protobuf/google/protobuf/timestamp_pb.js');
goog.object.extend(proto, google_protobuf_timestamp_pb);
var phenopackets_schema_v2_core_base_pb = require('../../../../phenopackets/schema/v2/core/base_pb.js');
goog.object.extend(proto, phenopackets_schema_v2_core_base_pb);
goog.exportSymbol('proto.org.phenopackets.schema.v2.core.Individual', null, global);
goog.exportSymbol('proto.org.phenopackets.schema.v2.core.KaryotypicSex', null, global);
goog.exportSymbol('proto.org.phenopackets.schema.v2.core.Sex', null, global);
goog.exportSymbol('proto.org.phenopackets.schema.v2.core.VitalStatus', null, global);
goog.exportSymbol('proto.org.phenopackets.schema.v2.core.VitalStatus.Status', null, global);
/**
* Generated by JsPbCodeGenerator.
* @param {Array=} opt_data Optional initial data array, typically from a
* server response, or constructed directly in Javascript. The array is used
* in place and becomes part of the constructed object. It is not cloned.
* If no data is provided, the constructed object will be empty, but still
* valid.
* @extends {jspb.Message}
* @constructor
*/
proto.org.phenopackets.schema.v2.core.Individual = function(opt_data) {
jspb.Message.initialize(this, opt_data, 0, -1, proto.org.phenopackets.schema.v2.core.Individual.repeatedFields_, null);
};
goog.inherits(proto.org.phenopackets.schema.v2.core.Individual, jspb.Message);
if (goog.DEBUG && !COMPILED) {
/**
* @public
* @override
*/
proto.org.phenopackets.schema.v2.core.Individual.displayName = 'proto.org.phenopackets.schema.v2.core.Individual';
}
/**
* Generated by JsPbCodeGenerator.
* @param {Array=} opt_data Optional initial data array, typically from a
* server response, or constructed directly in Javascript. The array is used
* in place and becomes part of the constructed object. It is not cloned.
* If no data is provided, the constructed object will be empty, but still
* valid.
* @extends {jspb.Message}
* @constructor
*/
proto.org.phenopackets.schema.v2.core.VitalStatus = function(opt_data) {
jspb.Message.initialize(this, opt_data, 0, -1, null, null);
};
goog.inherits(proto.org.phenopackets.schema.v2.core.VitalStatus, jspb.Message);
if (goog.DEBUG && !COMPILED) {
/**
* @public
* @override
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.displayName = 'proto.org.phenopackets.schema.v2.core.VitalStatus';
}
/**
* List of repeated fields within this message type.
* @private {!Array<number>}
* @const
*/
proto.org.phenopackets.schema.v2.core.Individual.repeatedFields_ = [2];
if (jspb.Message.GENERATE_TO_OBJECT) {
/**
* Creates an object representation of this proto.
* Field names that are reserved in JavaScript and will be renamed to pb_name.
* Optional fields that are not set will be set to undefined.
* To access a reserved field use, foo.pb_<name>, eg, foo.pb_default.
* For the list of reserved names please see:
* net/proto2/compiler/js/internal/generator.cc#kKeyword.
* @param {boolean=} opt_includeInstance Deprecated. whether to include the
* JSPB instance for transitional soy proto support:
* http://goto/soy-param-migration
* @return {!Object}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.toObject = function(opt_includeInstance) {
return proto.org.phenopackets.schema.v2.core.Individual.toObject(opt_includeInstance, this);
};
/**
* Static version of the {@see toObject} method.
* @param {boolean|undefined} includeInstance Deprecated. Whether to include
* the JSPB instance for transitional soy proto support:
* http://goto/soy-param-migration
* @param {!proto.org.phenopackets.schema.v2.core.Individual} msg The msg instance to transform.
* @return {!Object}
* @suppress {unusedLocalVariables} f is only used for nested messages
*/
proto.org.phenopackets.schema.v2.core.Individual.toObject = function(includeInstance, msg) {
var f, obj = {
id: jspb.Message.getFieldWithDefault(msg, 1, ""),
alternateIdsList: (f = jspb.Message.getRepeatedField(msg, 2)) == null ? undefined : f,
dateOfBirth: (f = msg.getDateOfBirth()) && google_protobuf_timestamp_pb.Timestamp.toObject(includeInstance, f),
timeAtLastEncounter: (f = msg.getTimeAtLastEncounter()) && phenopackets_schema_v2_core_base_pb.TimeElement.toObject(includeInstance, f),
vitalStatus: (f = msg.getVitalStatus()) && proto.org.phenopackets.schema.v2.core.VitalStatus.toObject(includeInstance, f),
sex: jspb.Message.getFieldWithDefault(msg, 6, 0),
karyotypicSex: jspb.Message.getFieldWithDefault(msg, 7, 0),
gender: (f = msg.getGender()) && phenopackets_schema_v2_core_base_pb.OntologyClass.toObject(includeInstance, f),
taxonomy: (f = msg.getTaxonomy()) && phenopackets_schema_v2_core_base_pb.OntologyClass.toObject(includeInstance, f)
};
if (includeInstance) {
obj.$jspbMessageInstance = msg;
}
return obj;
};
}
/**
* Deserializes binary data (in protobuf wire format).
* @param {jspb.ByteSource} bytes The bytes to deserialize.
* @return {!proto.org.phenopackets.schema.v2.core.Individual}
*/
proto.org.phenopackets.schema.v2.core.Individual.deserializeBinary = function(bytes) {
var reader = new jspb.BinaryReader(bytes);
var msg = new proto.org.phenopackets.schema.v2.core.Individual;
return proto.org.phenopackets.schema.v2.core.Individual.deserializeBinaryFromReader(msg, reader);
};
/**
* Deserializes binary data (in protobuf wire format) from the
* given reader into the given message object.
* @param {!proto.org.phenopackets.schema.v2.core.Individual} msg The message object to deserialize into.
* @param {!jspb.BinaryReader} reader The BinaryReader to use.
* @return {!proto.org.phenopackets.schema.v2.core.Individual}
*/
proto.org.phenopackets.schema.v2.core.Individual.deserializeBinaryFromReader = function(msg, reader) {
while (reader.nextField()) {
if (reader.isEndGroup()) {
break;
}
var field = reader.getFieldNumber();
switch (field) {
case 1:
var value = /** @type {string} */ (reader.readString());
msg.setId(value);
break;
case 2:
var value = /** @type {string} */ (reader.readString());
msg.addAlternateIds(value);
break;
case 3:
var value = new google_protobuf_timestamp_pb.Timestamp;
reader.readMessage(value,google_protobuf_timestamp_pb.Timestamp.deserializeBinaryFromReader);
msg.setDateOfBirth(value);
break;
case 4:
var value = new phenopackets_schema_v2_core_base_pb.TimeElement;
reader.readMessage(value,phenopackets_schema_v2_core_base_pb.TimeElement.deserializeBinaryFromReader);
msg.setTimeAtLastEncounter(value);
break;
case 5:
var value = new proto.org.phenopackets.schema.v2.core.VitalStatus;
reader.readMessage(value,proto.org.phenopackets.schema.v2.core.VitalStatus.deserializeBinaryFromReader);
msg.setVitalStatus(value);
break;
case 6:
var value = /** @type {!proto.org.phenopackets.schema.v2.core.Sex} */ (reader.readEnum());
msg.setSex(value);
break;
case 7:
var value = /** @type {!proto.org.phenopackets.schema.v2.core.KaryotypicSex} */ (reader.readEnum());
msg.setKaryotypicSex(value);
break;
case 8:
var value = new phenopackets_schema_v2_core_base_pb.OntologyClass;
reader.readMessage(value,phenopackets_schema_v2_core_base_pb.OntologyClass.deserializeBinaryFromReader);
msg.setGender(value);
break;
case 9:
var value = new phenopackets_schema_v2_core_base_pb.OntologyClass;
reader.readMessage(value,phenopackets_schema_v2_core_base_pb.OntologyClass.deserializeBinaryFromReader);
msg.setTaxonomy(value);
break;
default:
reader.skipField();
break;
}
}
return msg;
};
/**
* Serializes the message to binary data (in protobuf wire format).
* @return {!Uint8Array}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.serializeBinary = function() {
var writer = new jspb.BinaryWriter();
proto.org.phenopackets.schema.v2.core.Individual.serializeBinaryToWriter(this, writer);
return writer.getResultBuffer();
};
/**
* Serializes the given message to binary data (in protobuf wire
* format), writing to the given BinaryWriter.
* @param {!proto.org.phenopackets.schema.v2.core.Individual} message
* @param {!jspb.BinaryWriter} writer
* @suppress {unusedLocalVariables} f is only used for nested messages
*/
proto.org.phenopackets.schema.v2.core.Individual.serializeBinaryToWriter = function(message, writer) {
var f = undefined;
f = message.getId();
if (f.length > 0) {
writer.writeString(
1,
f
);
}
f = message.getAlternateIdsList();
if (f.length > 0) {
writer.writeRepeatedString(
2,
f
);
}
f = message.getDateOfBirth();
if (f != null) {
writer.writeMessage(
3,
f,
google_protobuf_timestamp_pb.Timestamp.serializeBinaryToWriter
);
}
f = message.getTimeAtLastEncounter();
if (f != null) {
writer.writeMessage(
4,
f,
phenopackets_schema_v2_core_base_pb.TimeElement.serializeBinaryToWriter
);
}
f = message.getVitalStatus();
if (f != null) {
writer.writeMessage(
5,
f,
proto.org.phenopackets.schema.v2.core.VitalStatus.serializeBinaryToWriter
);
}
f = message.getSex();
if (f !== 0.0) {
writer.writeEnum(
6,
f
);
}
f = message.getKaryotypicSex();
if (f !== 0.0) {
writer.writeEnum(
7,
f
);
}
f = message.getGender();
if (f != null) {
writer.writeMessage(
8,
f,
phenopackets_schema_v2_core_base_pb.OntologyClass.serializeBinaryToWriter
);
}
f = message.getTaxonomy();
if (f != null) {
writer.writeMessage(
9,
f,
phenopackets_schema_v2_core_base_pb.OntologyClass.serializeBinaryToWriter
);
}
};
/**
* optional string id = 1;
* @return {string}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.getId = function() {
return /** @type {string} */ (jspb.Message.getFieldWithDefault(this, 1, ""));
};
/**
* @param {string} value
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.setId = function(value) {
return jspb.Message.setProto3StringField(this, 1, value);
};
/**
* repeated string alternate_ids = 2;
* @return {!Array<string>}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.getAlternateIdsList = function() {
return /** @type {!Array<string>} */ (jspb.Message.getRepeatedField(this, 2));
};
/**
* @param {!Array<string>} value
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.setAlternateIdsList = function(value) {
return jspb.Message.setField(this, 2, value || []);
};
/**
* @param {string} value
* @param {number=} opt_index
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.addAlternateIds = function(value, opt_index) {
return jspb.Message.addToRepeatedField(this, 2, value, opt_index);
};
/**
* Clears the list making it empty but non-null.
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.clearAlternateIdsList = function() {
return this.setAlternateIdsList([]);
};
/**
* optional google.protobuf.Timestamp date_of_birth = 3;
* @return {?proto.google.protobuf.Timestamp}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.getDateOfBirth = function() {
return /** @type{?proto.google.protobuf.Timestamp} */ (
jspb.Message.getWrapperField(this, google_protobuf_timestamp_pb.Timestamp, 3));
};
/**
* @param {?proto.google.protobuf.Timestamp|undefined} value
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.setDateOfBirth = function(value) {
return jspb.Message.setWrapperField(this, 3, value);
};
/**
* Clears the message field making it undefined.
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.clearDateOfBirth = function() {
return this.setDateOfBirth(undefined);
};
/**
* Returns whether this field is set.
* @return {boolean}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.hasDateOfBirth = function() {
return jspb.Message.getField(this, 3) != null;
};
/**
* optional TimeElement time_at_last_encounter = 4;
* @return {?proto.org.phenopackets.schema.v2.core.TimeElement}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.getTimeAtLastEncounter = function() {
return /** @type{?proto.org.phenopackets.schema.v2.core.TimeElement} */ (
jspb.Message.getWrapperField(this, phenopackets_schema_v2_core_base_pb.TimeElement, 4));
};
/**
* @param {?proto.org.phenopackets.schema.v2.core.TimeElement|undefined} value
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.setTimeAtLastEncounter = function(value) {
return jspb.Message.setWrapperField(this, 4, value);
};
/**
* Clears the message field making it undefined.
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.clearTimeAtLastEncounter = function() {
return this.setTimeAtLastEncounter(undefined);
};
/**
* Returns whether this field is set.
* @return {boolean}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.hasTimeAtLastEncounter = function() {
return jspb.Message.getField(this, 4) != null;
};
/**
* optional VitalStatus vital_status = 5;
* @return {?proto.org.phenopackets.schema.v2.core.VitalStatus}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.getVitalStatus = function() {
return /** @type{?proto.org.phenopackets.schema.v2.core.VitalStatus} */ (
jspb.Message.getWrapperField(this, proto.org.phenopackets.schema.v2.core.VitalStatus, 5));
};
/**
* @param {?proto.org.phenopackets.schema.v2.core.VitalStatus|undefined} value
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.setVitalStatus = function(value) {
return jspb.Message.setWrapperField(this, 5, value);
};
/**
* Clears the message field making it undefined.
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.clearVitalStatus = function() {
return this.setVitalStatus(undefined);
};
/**
* Returns whether this field is set.
* @return {boolean}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.hasVitalStatus = function() {
return jspb.Message.getField(this, 5) != null;
};
/**
* optional Sex sex = 6;
* @return {!proto.org.phenopackets.schema.v2.core.Sex}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.getSex = function() {
return /** @type {!proto.org.phenopackets.schema.v2.core.Sex} */ (jspb.Message.getFieldWithDefault(this, 6, 0));
};
/**
* @param {!proto.org.phenopackets.schema.v2.core.Sex} value
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.setSex = function(value) {
return jspb.Message.setProto3EnumField(this, 6, value);
};
/**
* optional KaryotypicSex karyotypic_sex = 7;
* @return {!proto.org.phenopackets.schema.v2.core.KaryotypicSex}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.getKaryotypicSex = function() {
return /** @type {!proto.org.phenopackets.schema.v2.core.KaryotypicSex} */ (jspb.Message.getFieldWithDefault(this, 7, 0));
};
/**
* @param {!proto.org.phenopackets.schema.v2.core.KaryotypicSex} value
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.setKaryotypicSex = function(value) {
return jspb.Message.setProto3EnumField(this, 7, value);
};
/**
* optional OntologyClass gender = 8;
* @return {?proto.org.phenopackets.schema.v2.core.OntologyClass}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.getGender = function() {
return /** @type{?proto.org.phenopackets.schema.v2.core.OntologyClass} */ (
jspb.Message.getWrapperField(this, phenopackets_schema_v2_core_base_pb.OntologyClass, 8));
};
/**
* @param {?proto.org.phenopackets.schema.v2.core.OntologyClass|undefined} value
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.setGender = function(value) {
return jspb.Message.setWrapperField(this, 8, value);
};
/**
* Clears the message field making it undefined.
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.clearGender = function() {
return this.setGender(undefined);
};
/**
* Returns whether this field is set.
* @return {boolean}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.hasGender = function() {
return jspb.Message.getField(this, 8) != null;
};
/**
* optional OntologyClass taxonomy = 9;
* @return {?proto.org.phenopackets.schema.v2.core.OntologyClass}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.getTaxonomy = function() {
return /** @type{?proto.org.phenopackets.schema.v2.core.OntologyClass} */ (
jspb.Message.getWrapperField(this, phenopackets_schema_v2_core_base_pb.OntologyClass, 9));
};
/**
* @param {?proto.org.phenopackets.schema.v2.core.OntologyClass|undefined} value
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.setTaxonomy = function(value) {
return jspb.Message.setWrapperField(this, 9, value);
};
/**
* Clears the message field making it undefined.
* @return {!proto.org.phenopackets.schema.v2.core.Individual} returns this
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.clearTaxonomy = function() {
return this.setTaxonomy(undefined);
};
/**
* Returns whether this field is set.
* @return {boolean}
*/
proto.org.phenopackets.schema.v2.core.Individual.prototype.hasTaxonomy = function() {
return jspb.Message.getField(this, 9) != null;
};
if (jspb.Message.GENERATE_TO_OBJECT) {
/**
* Creates an object representation of this proto.
* Field names that are reserved in JavaScript and will be renamed to pb_name.
* Optional fields that are not set will be set to undefined.
* To access a reserved field use, foo.pb_<name>, eg, foo.pb_default.
* For the list of reserved names please see:
* net/proto2/compiler/js/internal/generator.cc#kKeyword.
* @param {boolean=} opt_includeInstance Deprecated. whether to include the
* JSPB instance for transitional soy proto support:
* http://goto/soy-param-migration
* @return {!Object}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.toObject = function(opt_includeInstance) {
return proto.org.phenopackets.schema.v2.core.VitalStatus.toObject(opt_includeInstance, this);
};
/**
* Static version of the {@see toObject} method.
* @param {boolean|undefined} includeInstance Deprecated. Whether to include
* the JSPB instance for transitional soy proto support:
* http://goto/soy-param-migration
* @param {!proto.org.phenopackets.schema.v2.core.VitalStatus} msg The msg instance to transform.
* @return {!Object}
* @suppress {unusedLocalVariables} f is only used for nested messages
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.toObject = function(includeInstance, msg) {
var f, obj = {
status: jspb.Message.getFieldWithDefault(msg, 1, 0),
timeOfDeath: (f = msg.getTimeOfDeath()) && phenopackets_schema_v2_core_base_pb.TimeElement.toObject(includeInstance, f),
causeOfDeath: (f = msg.getCauseOfDeath()) && phenopackets_schema_v2_core_base_pb.OntologyClass.toObject(includeInstance, f),
survivalTimeInDays: jspb.Message.getFieldWithDefault(msg, 4, 0)
};
if (includeInstance) {
obj.$jspbMessageInstance = msg;
}
return obj;
};
}
/**
* Deserializes binary data (in protobuf wire format).
* @param {jspb.ByteSource} bytes The bytes to deserialize.
* @return {!proto.org.phenopackets.schema.v2.core.VitalStatus}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.deserializeBinary = function(bytes) {
var reader = new jspb.BinaryReader(bytes);
var msg = new proto.org.phenopackets.schema.v2.core.VitalStatus;
return proto.org.phenopackets.schema.v2.core.VitalStatus.deserializeBinaryFromReader(msg, reader);
};
/**
* Deserializes binary data (in protobuf wire format) from the
* given reader into the given message object.
* @param {!proto.org.phenopackets.schema.v2.core.VitalStatus} msg The message object to deserialize into.
* @param {!jspb.BinaryReader} reader The BinaryReader to use.
* @return {!proto.org.phenopackets.schema.v2.core.VitalStatus}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.deserializeBinaryFromReader = function(msg, reader) {
while (reader.nextField()) {
if (reader.isEndGroup()) {
break;
}
var field = reader.getFieldNumber();
switch (field) {
case 1:
var value = /** @type {!proto.org.phenopackets.schema.v2.core.VitalStatus.Status} */ (reader.readEnum());
msg.setStatus(value);
break;
case 2:
var value = new phenopackets_schema_v2_core_base_pb.TimeElement;
reader.readMessage(value,phenopackets_schema_v2_core_base_pb.TimeElement.deserializeBinaryFromReader);
msg.setTimeOfDeath(value);
break;
case 3:
var value = new phenopackets_schema_v2_core_base_pb.OntologyClass;
reader.readMessage(value,phenopackets_schema_v2_core_base_pb.OntologyClass.deserializeBinaryFromReader);
msg.setCauseOfDeath(value);
break;
case 4:
var value = /** @type {number} */ (reader.readUint32());
msg.setSurvivalTimeInDays(value);
break;
default:
reader.skipField();
break;
}
}
return msg;
};
/**
* Serializes the message to binary data (in protobuf wire format).
* @return {!Uint8Array}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.serializeBinary = function() {
var writer = new jspb.BinaryWriter();
proto.org.phenopackets.schema.v2.core.VitalStatus.serializeBinaryToWriter(this, writer);
return writer.getResultBuffer();
};
/**
* Serializes the given message to binary data (in protobuf wire
* format), writing to the given BinaryWriter.
* @param {!proto.org.phenopackets.schema.v2.core.VitalStatus} message
* @param {!jspb.BinaryWriter} writer
* @suppress {unusedLocalVariables} f is only used for nested messages
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.serializeBinaryToWriter = function(message, writer) {
var f = undefined;
f = message.getStatus();
if (f !== 0.0) {
writer.writeEnum(
1,
f
);
}
f = message.getTimeOfDeath();
if (f != null) {
writer.writeMessage(
2,
f,
phenopackets_schema_v2_core_base_pb.TimeElement.serializeBinaryToWriter
);
}
f = message.getCauseOfDeath();
if (f != null) {
writer.writeMessage(
3,
f,
phenopackets_schema_v2_core_base_pb.OntologyClass.serializeBinaryToWriter
);
}
f = message.getSurvivalTimeInDays();
if (f !== 0) {
writer.writeUint32(
4,
f
);
}
};
/**
* @enum {number}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.Status = {
UNKNOWN_STATUS: 0,
ALIVE: 1,
DECEASED: 2
};
/**
* optional Status status = 1;
* @return {!proto.org.phenopackets.schema.v2.core.VitalStatus.Status}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.getStatus = function() {
return /** @type {!proto.org.phenopackets.schema.v2.core.VitalStatus.Status} */ (jspb.Message.getFieldWithDefault(this, 1, 0));
};
/**
* @param {!proto.org.phenopackets.schema.v2.core.VitalStatus.Status} value
* @return {!proto.org.phenopackets.schema.v2.core.VitalStatus} returns this
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.setStatus = function(value) {
return jspb.Message.setProto3EnumField(this, 1, value);
};
/**
* optional TimeElement time_of_death = 2;
* @return {?proto.org.phenopackets.schema.v2.core.TimeElement}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.getTimeOfDeath = function() {
return /** @type{?proto.org.phenopackets.schema.v2.core.TimeElement} */ (
jspb.Message.getWrapperField(this, phenopackets_schema_v2_core_base_pb.TimeElement, 2));
};
/**
* @param {?proto.org.phenopackets.schema.v2.core.TimeElement|undefined} value
* @return {!proto.org.phenopackets.schema.v2.core.VitalStatus} returns this
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.setTimeOfDeath = function(value) {
return jspb.Message.setWrapperField(this, 2, value);
};
/**
* Clears the message field making it undefined.
* @return {!proto.org.phenopackets.schema.v2.core.VitalStatus} returns this
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.clearTimeOfDeath = function() {
return this.setTimeOfDeath(undefined);
};
/**
* Returns whether this field is set.
* @return {boolean}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.hasTimeOfDeath = function() {
return jspb.Message.getField(this, 2) != null;
};
/**
* optional OntologyClass cause_of_death = 3;
* @return {?proto.org.phenopackets.schema.v2.core.OntologyClass}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.getCauseOfDeath = function() {
return /** @type{?proto.org.phenopackets.schema.v2.core.OntologyClass} */ (
jspb.Message.getWrapperField(this, phenopackets_schema_v2_core_base_pb.OntologyClass, 3));
};
/**
* @param {?proto.org.phenopackets.schema.v2.core.OntologyClass|undefined} value
* @return {!proto.org.phenopackets.schema.v2.core.VitalStatus} returns this
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.setCauseOfDeath = function(value) {
return jspb.Message.setWrapperField(this, 3, value);
};
/**
* Clears the message field making it undefined.
* @return {!proto.org.phenopackets.schema.v2.core.VitalStatus} returns this
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.clearCauseOfDeath = function() {
return this.setCauseOfDeath(undefined);
};
/**
* Returns whether this field is set.
* @return {boolean}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.hasCauseOfDeath = function() {
return jspb.Message.getField(this, 3) != null;
};
/**
* optional uint32 survival_time_in_days = 4;
* @return {number}
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.getSurvivalTimeInDays = function() {
return /** @type {number} */ (jspb.Message.getFieldWithDefault(this, 4, 0));
};
/**
* @param {number} value
* @return {!proto.org.phenopackets.schema.v2.core.VitalStatus} returns this
*/
proto.org.phenopackets.schema.v2.core.VitalStatus.prototype.setSurvivalTimeInDays = function(value) {
return jspb.Message.setProto3IntField(this, 4, value);
};
/**
* @enum {number}
*/
proto.org.phenopackets.schema.v2.core.Sex = {
UNKNOWN_SEX: 0,
FEMALE: 1,
MALE: 2,
OTHER_SEX: 3
};
/**
* @enum {number}
*/
proto.org.phenopackets.schema.v2.core.KaryotypicSex = {
UNKNOWN_KARYOTYPE: 0,
XX: 1,
XY: 2,
XO: 3,
XXY: 4,
XXX: 5,
XXYY: 6,
XXXY: 7,
XXXX: 8,
XYY: 9,
OTHER_KARYOTYPE: 10
};
goog.object.extend(exports, proto.org.phenopackets.schema.v2.core);